Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015090.1 Kokia drynarioides strain JFW-HI SEQ_130134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  762378

Tables:   1   2   3   

This is table  3  of  3  ( 280 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617219--617248
15
2.0
15
93
0
51
33
3
26
36
1.73
634877--634916
19
2.0
20
85
9
55
47
15
5
32
1.66
645868--645915
13
3.7
13
80
8
53
37
20
4
37
1.72
645867--645908
13
3.1
14
86
10
61
33
19
4
42
1.72
646083--646130
15
3.4
15
72
16
57
18
45
31
4
1.68
646055--646148
27
3.6
27
84
8
131
22
45
25
6
1.76
646186--646256
30
2.4
29
86
9
90
9
54
18
16
1.69
649175--649203
14
2.1
14
100
0
58
31
13
6
48
1.69
658061--658104
18
2.3
19
80
11
54
59
0
0
40
0.98
657999--658114
49
2.4
50
77
13
134
52
2
6
37
1.42
664248--664275
2
14.0
2
100
0
56
50
0
0
50
1.00
665369--665413
24
2.0
22
82
8
54
44
2
6
46
1.42
668069--668103
18
2.0
18
88
5
54
42
22
2
31
1.68
676290--676338
24
2.0
26
84
8
66
44
2
4
48
1.33
678582--678636
24
2.3
24
93
3
94
43
14
3
38
1.63
687644--687714
29
2.4
29
80
4
88
28
8
14
49
1.72
687796--687831
2
18.0
2
100
0
72
50
0
0
50
1.00
688508--688551
17
2.8
15
80
12
52
34
2
0
63
1.07
688513--688548
17
2.1
17
89
0
54
30
2
0
66
1.06
688906--688932
6
4.5
6
100
0
54
70
0
0
29
0.88
700489--700583
49
2.0
47
83
4
118
55
8
12
23
1.64
711738--711820
33
2.4
34
88
4
123
51
3
18
26
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
711961--711995
18
1.9
18
88
0
52
25
8
11
54
1.64
733252--733281
1
30.0
1
100
0
60
100
0
0
0
0.00
734421--734521
19
5.1
19
72
12
78
71
0
1
25
1.03
734420--734521
10
10.6
9
76
16
80
70
0
1
26
1.04
734862--734902
17
2.6
16
85
14
50
24
4
0
70
1.06
734924--735124
87
2.4
82
73
13
199
31
10
16
41
1.83
735818--735847
16
1.9
16
93
6
53
50
6
6
36
1.55
736837--736884
19
2.5
19
86
0
69
60
4
0
35
1.16
737483--737522
3
13.3
3
100
0
80
32
0
0
67
0.91
741302--741361
31
1.9
32
83
10
79
16
16
20
46
1.84
751619--751661
19
2.2
20
83
4
52
53
2
11
32
1.50
754895--754947
25
2.1
25
92
0
88
32
3
15
49
1.62
755112--755184
11
6.0
12
73
22
55
54
1
0
43
1.08
755093--755199
16
7.0
16
71
12
64
52
1
0
44
1.18
755115--755200
36
2.5
33
83
11
100
52
2
0
45
1.13
762018--762073
4
15.5
4
81
10
52
76
0
23
0
0.78
762018--762101
18
4.6
18
79
7
89
71
1
27
0
0.93
762020--762079
14
4.3
14
79
12
61
73
0
26
0
0.84

Tables:   1   2   3

The End!