Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015102.1 Kokia drynarioides strain JFW-HI SEQ_130146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  783730

Tables:   1   2   3   

This is table  3  of  3  ( 262 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
695852--695881
16
1.9
16
93
6
53
16
13
0
70
1.18
695846--695907
22
2.9
22
88
7
74
14
11
1
72
1.19
695861--695907
21
2.2
22
92
3
78
14
8
2
74
1.15
697826--697878
21
2.6
20
79
11
54
58
7
0
33
1.26
702984--703017
18
1.9
18
88
5
52
8
8
32
50
1.64
706082--706170
32
2.9
30
83
6
108
13
15
17
52
1.74
708397--708430
8
4.2
8
92
0
50
50
11
0
38
1.39
713582--713653
36
2.0
35
86
5
99
58
2
2
36
1.27
732581--732619
18
2.2
18
95
4
71
15
15
12
56
1.68
733216--733254
17
2.3
17
91
8
62
82
0
17
0
0.68
759381--759427
21
2.2
21
92
0
76
34
8
21
36
1.84
768005--768033
3
9.7
3
100
0
58
0
31
0
68
0.89
768404--768527
56
2.2
56
95
0
221
45
4
16
33
1.68
769338--769500
43
3.8
43
87
0
218
36
10
20
32
1.87
774434--774466
16
2.0
17
88
5
50
63
6
0
30
1.18
774718--774751
18
1.9
18
94
5
61
35
0
8
55
1.31
776671--776708
19
2.0
19
85
10
51
18
2
2
76
1.02
777139--777180
14
2.8
16
79
20
63
57
0
0
42
0.99
779256--779301
23
2.0
23
82
0
56
45
13
4
36
1.63
779327--779367
16
2.6
16
96
3
75
34
21
0
43
1.53
779624--779657
17
1.9
17
88
5
50
32
0
11
55
1.36
780042--780095
29
1.9
28
82
14
67
51
5
3
38
1.43

Tables:   1   2   3

The End!