Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015190.1 Kokia drynarioides strain JFW-HI SEQ_130234, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  593296

Tables:   1   2   

This is table  2  of  2  ( 164 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
471195--471258
26
2.5
26
97
0
119
40
21
6
31
1.78
476325--476350
13
2.0
13
100
0
52
61
23
0
15
1.33
477076--477117
12
3.5
12
81
12
59
4
16
2
76
1.07
477068--477123
24
2.3
24
96
0
103
3
19
5
71
1.21
482364--482397
17
2.0
16
88
11
50
5
17
2
73
1.16
488495--488555
28
2.2
28
100
0
122
60
6
11
21
1.53
504235--504278
20
2.2
20
91
0
70
20
13
11
54
1.69
506981--507018
15
2.5
15
91
8
60
18
0
7
73
1.06
507036--507090
26
2.3
22
72
21
56
14
3
9
72
1.23
507285--507341
21
2.7
21
78
5
62
17
3
8
70
1.28
507291--507348
20
2.8
20
75
17
57
17
3
10
68
1.31
509729--509776
13
3.7
12
83
10
51
54
10
2
33
1.46
510376--510439
27
2.4
27
81
0
83
39
29
17
14
1.88
511259--511523
131
2.0
132
95
0
478
46
8
12
32
1.72
511879--511963
42
2.0
42
90
0
134
21
12
7
58
1.58
512375--512433
27
2.2
26
82
14
75
22
10
5
62
1.46
519865--519903
16
2.5
16
91
4
62
35
0
0
64
0.94
520575--520606
17
1.9
17
93
6
57
28
6
6
59
1.46
521231--521295
23
2.8
24
83
4
87
38
16
13
30
1.88
521231--521268
11
3.2
12
81
11
51
36
15
15
31
1.90
523751--523793
22
2.0
22
81
9
52
53
4
4
37
1.43
525232--525281
19
2.6
19
96
0
91
32
18
20
30
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
526422--526486
28
2.3
28
91
0
103
29
18
26
26
1.98
533985--534067
36
2.3
36
93
4
141
22
19
26
31
1.98
534417--534573
30
5.3
30
84
6
194
33
19
6
40
1.77
536328--536377
21
2.4
21
83
6
66
42
2
8
48
1.44
537828--537979
80
1.9
80
86
5
218
27
22
20
29
1.98
538998--539029
12
2.7
12
95
0
55
28
31
34
6
1.82
540378--540437
21
2.9
21
77
7
59
26
18
16
38
1.92
554815--554877
30
2.1
30
81
3
72
50
9
9
30
1.66
555073--555184
60
1.9
59
84
1
152
38
5
10
45
1.62
558418--558442
12
2.1
12
100
0
50
32
0
0
68
0.90
564721--564768
20
2.4
20
100
0
96
50
8
0
41
1.33
565353--565401
25
2.1
25
85
11
68
65
12
0
22
1.26
571948--572010
31
2.0
31
90
0
99
52
11
0
36
1.37
574553--574592
20
2.0
20
95
0
71
77
5
12
5
1.09
579233--579291
10
6.1
10
71
15
52
64
0
0
35
0.94
579469--579514
22
2.0
23
84
12
60
45
28
0
26
1.54
579469--579545
38
2.1
38
82
7
95
49
23
0
27
1.50
582731--582767
15
2.3
17
86
9
51
67
0
21
10
1.21
582939--582985
24
2.0
24
91
0
76
57
8
10
23
1.60
586368--587333
501
1.9
498
83
2
1229
40
18
17
24
1.91
589414--593296
433
9.0
432
86
3
5135
27
17
14
40
1.88
589412--593296
649
6.0
646
92
1
5423
27
17
14
40
1.88

Tables:   1   2

The End!