Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015226.1 Kokia drynarioides strain JFW-HI SEQ_130270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  713267

Tables:   1   2   3   

This is table  3  of  3  ( 282 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
629602--630589
145
6.4
152
89
6
1435
29
17
19
33
1.95
629602--630589
305
3.2
301
90
5
1461
29
17
19
33
1.95
629602--630589
460
2.1
451
90
5
1507
29
17
19
33
1.95
629857--630589
155
4.7
156
89
6
1043
30
16
19
33
1.94
629602--630871
460
2.8
455
83
6
1275
29
16
19
33
1.94
630858--630904
23
2.0
23
100
0
94
36
12
29
21
1.91
631693--631722
8
3.8
8
100
0
60
10
0
0
90
0.47
640125--640279
83
1.9
82
84
6
206
23
12
6
58
1.57
641147--641250
38
2.7
39
72
16
101
55
4
2
36
1.36
643570--643626
6
9.5
6
76
5
53
5
17
1
75
1.07
643563--643619
29
1.9
30
89
3
89
7
15
3
73
1.18
643576--643619
23
1.9
23
86
9
63
6
15
2
75
1.12
650417--650494
40
1.9
42
94
5
142
38
2
10
48
1.51
651621--651659
5
7.8
5
100
0
78
41
38
0
20
1.53
656044--656246
112
1.8
113
82
1
264
36
12
11
38
1.80
660280--660333
26
2.0
27
85
3
74
35
3
3
57
1.34
660833--661013
45
4.0
45
93
0
301
21
21
25
31
1.98
662957--663006
16
3.2
16
73
21
52
34
0
6
60
1.21
663658--663700
21
2.1
21
86
4
61
62
6
0
30
1.21
663775--663852
23
3.3
22
71
20
59
65
10
0
24
1.23
663872--663906
18
1.9
18
94
0
61
60
14
0
25
1.35
664071--664100
7
4.4
7
95
4
53
0
43
0
56
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
665863--665901
18
2.2
18
85
0
51
71
2
0
25
0.98
670742--670771
9
3.3
9
95
0
51
20
36
0
43
1.52
674141--674189
23
2.0
25
84
7
66
36
0
12
51
1.40
678383--678408
2
13.0
2
100
0
52
0
50
0
50
1.00
679645--679732
30
2.9
30
78
9
81
47
15
29
6
1.72
679662--679702
21
2.0
21
95
0
73
41
19
29
9
1.83
679703--679743
21
2.0
21
85
0
55
51
12
29
7
1.66
693287--693327
20
2.0
21
85
4
57
46
0
19
34
1.50
695427--695468
22
1.9
22
100
0
84
23
9
9
57
1.60
699442--699477
7
5.1
7
100
0
72
72
0
0
27
0.85
699885--699964
31
2.6
31
82
9
85
50
12
6
31
1.65
700334--700369
17
2.1
17
89
0
54
58
0
0
41
0.98
701003--701073
31
2.2
32
78
7
83
40
7
15
36
1.74
700983--701073
31
3.0
31
76
9
82
45
7
13
34
1.72
708520--708570
26
2.0
26
88
0
75
56
3
21
17
1.57
711379--711428
26
1.9
26
87
0
73
30
0
12
58
1.34
712421--712570
23
6.5
23
80
6
160
42
21
24
11
1.85
712421--712570
46
3.2
46
86
4
187
42
21
24
11
1.85
712421--712570
69
2.2
68
83
8
187
42
21
24
11
1.85
712633--712680
24
1.9
26
84
16
66
31
22
0
45
1.53

Tables:   1   2   3

The End!