Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold151
Parameters: 2 7 7 80 10 50 1000
Length:  367700

Tables:   1   2   3   4   

This is table  4  of  4  ( 399 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
325653--325762
48
2.3
46
78
17
109
45
2
1
50
1.26
326123--326183
8
7.8
8
75
23
51
50
0
1
47
1.10
326126--326180
27
2.0
27
83
13
69
50
0
1
47
1.11
326789--326833
23
1.9
24
86
4
65
57
2
2
37
1.23
326785--326833
9
5.9
9
72
18
52
55
2
2
40
1.23
327179--327234
18
3.1
18
80
12
60
39
0
3
57
1.16
327542--327582
21
1.9
22
85
14
59
53
0
0
46
1.00
331334--331377
4
11.2
4
90
4
63
79
0
20
0
0.73
331335--331400
23
2.9
23
72
6
53
77
1
21
0
0.85
331332--331371
19
2.0
20
90
4
64
82
0
17
0
0.67
331333--331399
19
3.4
19
79
6
62
77
1
20
0
0.85
331668--331693
7
3.7
7
100
0
52
76
0
11
11
1.01
332965--332999
17
2.0
18
88
5
54
54
5
8
31
1.54
340379--340404
10
2.6
10
100
0
52
80
0
7
11
0.89
341754--341814
23
3.3
17
72
25
52
67
0
0
32
0.91
341756--341810
10
5.3
10
79
16
51
69
0
0
30
0.89
341756--341809
11
5.1
11
78
14
60
70
0
0
29
0.88
341767--341816
11
4.4
12
75
12
52
66
0
0
34
0.92
342343--342367
13
1.9
13
100
0
50
64
0
0
36
0.94
342353--342468
49
2.4
49
78
11
132
63
6
0
30
1.18
342942--342987
24
2.0
23
82
4
56
60
2
4
32
1.28
343111--343213
36
2.9
35
78
17
99
61
1
0
35
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346347--346460
50
2.3
50
92
0
183
27
16
14
41
1.88
348864--348982
51
2.3
51
85
0
166
31
24
10
33
1.90
348916--349087
79
2.2
79
88
0
245
29
27
11
32
1.91
351155--351196
10
4.1
11
76
17
54
66
0
19
14
1.25
351155--351197
15
2.9
15
79
10
52
67
0
18
13
1.23
351155--351213
32
1.9
30
86
6
82
69
0
18
11
1.18
353877--353913
15
2.5
15
90
0
65
64
0
21
13
1.27
354537--354581
22
2.0
23
86
4
65
55
0
0
44
0.99
356464--356505
17
2.5
17
76
3
50
42
0
0
57
0.99
359028--359090
20
3.2
20
74
17
60
71
1
25
1
1.04
359868--359930
18
3.9
16
74
15
58
44
1
0
53
1.10
359868--359930
16
3.8
16
76
14
56
44
1
0
53
1.10
360438--360468
16
1.9
16
93
0
53
67
0
0
32
0.91
360456--360521
9
7.0
9
76
21
64
65
3
0
31
1.08
361544--361597
26
2.1
26
89
3
83
50
0
0
50
1.00
364181--364269
18
5.2
17
73
18
69
57
1
0
41
1.06
364209--364270
16
3.8
16
75
12
54
53
1
0
45
1.10

Tables:   1   2   3   4

The End!