Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold173
Parameters: 2 7 7 80 10 50 1000
Length:  2040036

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   

This is table  16  of  16  ( 1814 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2015406--2017209
86
21.0
85
86
4
2398
22
17
31
28
1.96
2015394--2017207
29
63.2
29
88
3
2392
22
17
31
28
1.96
2015394--2017209
115
15.8
115
89
2
2488
22
17
31
28
1.96
2018430--2018503
1
74.0
1
75
0
67
1
2
8
87
0.68
2018447--2018504
12
4.8
12
87
12
75
0
1
12
86
0.65
2031567--2031621
22
2.5
22
100
0
110
61
9
10
18
1.54
2032531--2032605
20
3.8
20
80
3
80
40
12
13
34
1.81
2032528--2032605
40
2.0
39
87
2
111
39
12
12
34
1.82
2032863--2032896
16
2.1
17
88
5
52
58
0
0
41
0.98
2033070--2033158
2
45.0
2
90
2
144
47
0
3
49
1.18
2033070--2033153
18
4.7
18
98
0
159
46
0
3
50
1.19
2034001--2034130
64
2.0
65
87
3
190
46
10
8
33
1.69
2039031--2039069
13
3.0
13
85
10
53
66
0
28
5
1.12
2039035--2039068
18
1.9
18
88
5
52
67
0
29
2
1.05

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16

The End!