Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold213
Parameters: 2 7 7 80 10 50 1000
Length:  483536

Tables:   1   2   3   4   

This is table  4  of  4  ( 377 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439161--439206
18
2.4
19
82
7
58
45
0
0
54
0.99
440072--440112
2
20.5
2
100
0
82
48
0
0
51
1.00
440140--440186
17
2.7
18
83
9
62
61
0
2
36
1.08
441043--441107
33
2.0
33
81
6
78
30
3
1
64
1.18
443455--443485
3
10.3
3
100
0
62
67
0
0
32
0.91
445963--445993
2
15.5
2
93
0
53
51
0
0
48
1.00
448561--448589
4
7.2
4
100
0
58
27
0
0
72
0.85
451139--451179
2
20.5
2
94
0
73
53
0
46
0
1.00
453432--453562
66
2.0
66
98
0
253
22
16
16
44
1.86
456420--456477
23
2.5
24
94
5
109
41
5
15
37
1.70
461097--461154
23
2.5
24
94
5
109
41
5
15
37
1.70
477001--477025
13
1.9
13
100
0
50
36
16
16
32
1.90
476981--477045
33
2.0
33
90
0
103
40
16
13
29
1.88
478170--478196
12
2.2
12
100
0
54
55
14
0
29
1.40
478327--478489
50
3.3
50
91
1
274
42
14
26
15
1.86
480045--480793
79
9.5
79
93
0
1250
26
25
14
33
1.95
480045--480793
315
2.4
316
94
0
1313
26
25
14
33
1.95

Tables:   1   2   3   4

The End!