Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold234
Parameters: 2 7 7 80 10 50 1000
Length:  616507

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 499 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595395--595529
43
3.0
43
88
6
171
31
18
25
24
1.97
595444--595511
21
3.2
21
63
19
50
30
16
26
26
1.96
595451--595521
22
3.3
22
64
18
58
32
18
22
26
1.97
595588--595842
139
1.8
139
95
0
465
20
16
27
34
1.95
595585--595841
29
9.2
28
82
7
249
20
17
27
35
1.95
597270--597322
1
53.0
1
76
0
52
0
0
11
88
0.51
597253--597322
36
1.9
36
88
8
106
0
0
14
85
0.59
597253--597322
27
2.6
27
88
2
97
0
0
14
85
0.59
611357--611382
13
2.0
13
100
0
52
30
15
15
38
1.88
612268--612302
5
7.2
5
96
3
63
62
0
0
37
0.95
613635--613713
30
2.6
30
82
9
90
31
2
2
63
1.21
613635--613698
31
2.1
31
85
5
87
32
3
1
62
1.20
614748--614824
11
7.4
11
72
16
56
62
0
3
33
1.14
614748--614791
23
1.9
23
95
0
79
61
0
6
31
1.22
614750--614825
29
2.7
28
80
11
75
63
0
3
32
1.13
615190--615291
38
2.6
40
80
9
113
56
0
0
42
1.05
615227--615267
13
2.9
15
78
14
50
58
0
0
41
0.98
615245--615306
18
3.4
19
78
14
69
56
0
0
43
0.99
616354--616380
13
2.1
13
100
0
54
0
0
44
55
0.99

Tables:   1   2   3   4   5

The End!