Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2752
Parameters: 2 7 7 80 10 50 1000
Length:  500988

Tables:   1   2   3   

This is table  3  of  3  ( 259 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
468500--468551
22
2.4
22
81
12
54
42
11
5
40
1.65
469268--469314
19
2.6
18
90
6
76
46
19
2
31
1.61
471675--471753
20
3.9
19
74
9
68
34
12
12
40
1.81
471675--471753
41
2.0
39
87
5
113
34
12
12
40
1.81
473322--473346
13
1.9
13
100
0
50
32
16
16
36
1.90
473302--473369
32
2.1
33
91
2
111
38
14
14
32
1.87
474020--474049
15
1.9
16
93
6
53
23
13
3
60
1.48
475577--475626
21
2.3
21
80
10
57
56
4
18
22
1.58
477424--477454
15
2.1
15
93
0
53
48
16
22
12
1.80
479534--479571
13
2.9
13
88
0
58
36
18
13
31
1.89
479683--479728
21
2.2
20
81
11
58
32
19
4
43
1.71
481406--481496
39
2.3
40
79
9
105
37
5
23
34
1.78
482122--482173
19
2.7
20
87
6
79
42
15
13
28
1.85
495730--495789
9
6.8
9
80
5
61
86
8
3
1
0.74
495729--495778
24
2.1
24
92
0
82
90
8
2
0
0.54
495726--495777
10
5.2
10
88
9
72
88
9
1
0
0.59
495729--495778
1
50.0
1
79
0
55
90
8
2
0
0.54
497010--498478
29
50.2
28
82
8
1478
28
31
17
22
1.96
497014--498478
262
5.6
258
85
5
1725
28
31
17
22
1.96

Tables:   1   2   3

The End!