Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold289
Parameters: 2 7 7 80 10 50 1000
Length:  700734

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 503 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
671715--671739
12
2.1
12
100
0
50
24
24
8
44
1.80
671737--671835
43
2.3
43
87
0
144
24
18
10
47
1.79
671803--671888
25
3.4
25
73
17
77
24
22
9
44
1.82
671790--671866
25
3.0
25
75
20
95
27
22
6
44
1.77
671790--671915
52
2.3
56
86
6
170
24
20
10
44
1.83
671730--671909
95
1.9
96
82
3
229
23
19
10
46
1.80
671968--672008
14
2.9
14
89
10
66
19
21
12
46
1.82
672611--672677
34
2.0
32
83
13
82
64
13
14
7
1.49
673521--673572
26
2.0
26
100
0
104
30
7
23
38
1.83
676411--676460
19
2.5
20
83
3
66
36
20
14
30
1.91
680245--680390
52
2.8
52
90
2
222
28
19
20
31
1.97
680378--680404
13
2.1
13
100
0
54
29
14
14
40
1.86
688978--689010
13
2.4
14
85
15
50
42
15
15
27
1.86
688985--689010
13
2.0
13
100
0
52
38
15
15
30
1.88
688969--689031
34
1.9
32
87
12
92
39
17
14
28
1.89
692102--692133
2
16.0
2
100
0
64
50
0
0
50
1.00
697958--698000
20
2.1
21
95
4
79
41
0
0
58
0.98
697951--698023
36
2.0
38
84
10
98
38
0
2
58
1.12
697983--698032
16
3.2
16
82
2
57
34
0
6
60
1.21
698219--698257
18
2.2
18
86
9
53
66
0
0
33
0.92
698204--698265
15
3.8
16
76
17
56
62
1
0
35
1.05
700213--700259
14
3.4
14
77
16
53
38
0
6
55
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
700429--700531
38
2.6
40
83
12
140
45
10
22
21
1.82

Tables:   1   2   3   4   5

The End!