Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold292
Parameters: 2 7 7 80 10 50 1000
Length:  327286

Tables:   1   2   3   

This is table  3  of  3  ( 264 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289641--289734
29
3.2
29
72
11
93
27
9
10
52
1.67
289622--289879
58
4.5
57
81
1
192
25
11
12
50
1.74
297694--297747
20
2.7
20
100
0
108
31
11
20
37
1.88
297920--297971
20
2.6
20
71
0
50
42
15
11
30
1.82
301350--301421
36
2.0
36
97
0
135
31
13
12
41
1.82
312144--312196
21
2.6
20
82
11
63
56
5
0
37
1.23
312169--312247
39
2.0
39
97
0
149
39
8
0
51
1.33
312167--312234
20
3.5
19
69
18
59
42
8
0
48
1.34
312299--312571
146
1.9
144
83
6
354
57
6
0
34
1.31
312442--312492
25
2.0
26
84
3
68
60
0
0
39
0.97
312294--312571
74
3.8
72
79
7
263
57
6
0
34
1.30
312310--312583
73
3.8
73
77
10
249
56
7
1
35
1.35
315546--315586
7
5.7
7
86
13
57
31
0
0
68
0.90
315548--315596
22
2.2
22
82
7
55
34
0
2
63
1.06
316183--316257
27
2.8
27
80
10
82
46
1
0
52
1.09
316716--316773
25
2.4
25
76
23
61
63
1
0
34
1.04
316753--316810
20
2.8
21
84
10
75
62
1
0
36
1.06
317398--317431
2
17.5
2
93
6
61
50
0
0
50
1.00
319434--319540
41
2.7
40
82
5
130
40
16
11
31
1.84
321791--321835
2
23.0
2
95
4
83
48
0
51
0
1.00
322661--322707
21
2.2
22
84
3
60
12
6
6
74
1.20
323890--323916
14
1.9
14
100
0
54
51
3
0
44
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323892--323924
14
2.4
14
90
5
50
60
3
0
36
1.12
325502--325534
16
2.1
16
100
0
66
57
18
0
24
1.40

Tables:   1   2   3

The End!