Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold333
Parameters: 2 7 7 80 10 50 1000
Length:  853475

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 617 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
838446--838521
32
2.4
32
82
8
102
57
6
2
32
1.38
838806--838879
23
3.2
23
72
9
69
44
0
0
55
0.99
838810--838871
25
2.6
24
79
18
67
43
0
0
56
0.99
839282--839316
12
2.8
12
91
4
52
14
0
0
85
0.59
839280--839316
18
2.0
19
89
5
58
16
0
0
83
0.64
840050--840087
2
19.0
2
100
0
76
50
0
0
50
1.00
840908--840959
22
2.4
21
78
12
52
36
0
3
59
1.16
841000--841033
18
1.9
17
88
5
50
35
2
0
61
1.11
841218--841296
35
2.3
33
79
14
88
49
0
3
46
1.19
843408--843451
2
22.0
2
100
0
88
50
0
0
50
1.00
845977--846013
7
5.3
7
93
0
65
72
10
13
2
1.21
845977--846020
14
3.1
14
81
12
54
70
11
11
6
1.33
847418--847458
20
2.1
19
86
4
55
36
0
7
56
1.27
847575--847629
26
2.3
23
78
9
56
40
0
0
60
0.97
847591--847637
23
2.1
21
81
14
51
40
2
0
57
1.11
852056--852294
75
3.2
73
75
12
227
26
17
14
40
1.89
852078--852283
75
2.8
73
81
6
238
27
18
13
40
1.88

Tables:   1   2   3   4   5   6

The End!