Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold397
Parameters: 2 7 7 80 10 50 1000
Length:  433447

Tables:   1   2   3   4   

This is table  4  of  4  ( 373 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425464--425516
19
2.8
20
78
16
58
56
0
7
35
1.28
426888--426951
32
2.0
32
84
6
85
53
0
3
43
1.16
427023--427061
20
2.0
20
85
5
53
23
0
15
61
1.33
429448--429521
25
2.9
25
72
9
78
43
1
0
55
1.08
429447--429526
24
3.2
24
68
15
63
46
1
0
52
1.08
431386--431447
32
2.0
31
84
9
81
41
0
3
54
1.16
431431--431469
6
6.2
6
82
11
51
30
0
0
69
0.89
431421--431479
20
2.8
21
87
10
84
30
0
0
69
0.89
431400--431469
24
2.8
24
85
8
79
34
0
2
62
1.10
431441--431483
9
4.4
9
86
13
59
25
0
0
74
0.82
431435--431495
14
4.2
14
75
19
54
24
0
1
73
0.92
431419--431488
24
2.6
29
82
14
80
31
0
0
68
0.90
432825--432926
51
2.0
51
100
0
204
35
9
19
35
1.85

Tables:   1   2   3   4

The End!