Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold423
Parameters: 2 7 7 80 10 50 1000
Length:  617052

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 618 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
598823--598897
24
3.2
24
64
17
68
26
16
6
50
1.69
598822--598914
45
2.1
45
100
0
186
25
12
8
52
1.68
602093--602139
23
2.0
23
100
0
94
25
31
8
34
1.86
602443--602500
11
5.2
11
78
13
57
31
0
1
67
1.01
602456--602541
22
3.8
23
69
19
65
40
0
0
59
0.97
603033--603076
2
22.0
2
100
0
88
50
0
0
50
1.00
603071--603124
26
2.1
26
96
0
99
31
12
12
42
1.81
603401--603466
34
1.9
35
84
3
89
46
1
4
46
1.32
603783--603826
21
2.1
21
83
8
54
38
6
4
50
1.50
603793--603839
21
2.2
21
81
11
51
36
6
4
53
1.46
603920--603963
22
2.0
21
82
4
52
43
4
0
52
1.22
605018--605081
27
2.3
27
82
15
78
65
1
0
32
1.02
605707--605750
20
2.3
20
85
11
58
34
0
0
65
0.93
605697--605773
27
2.8
27
82
5
75
37
0
1
61
1.05
615566--615646
10
7.5
11
77
17
80
30
2
0
66
1.05
615581--615634
17
3.2
17
71
10
56
29
1
0
68
1.00
615577--615646
22
3.2
23
84
11
85
31
2
0
65
1.07
616977--617016
17
2.3
18
83
12
57
45
10
0
45
1.37

Tables:   1   2   3   4   5   6

The End!