Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold5
Parameters: 2 7 7 80 10 50 1000
Length:  1536239

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   

This is table  14  of  14  ( 1571 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1526244--1526294
20
2.7
18
85
11
66
37
0
0
62
0.95
1526240--1526309
20
3.2
22
76
13
65
38
0
0
61
0.96
1526205--1526313
18
5.6
19
69
20
57
36
0
0
62
1.02
1527575--1527624
16
3.2
16
81
13
59
40
4
0
56
1.18
1527997--1528041
22
2.0
22
86
0
63
60
0
0
40
0.97
1528855--1528894
17
2.3
18
91
4
64
50
0
2
47
1.14
1529251--1529342
28
3.4
27
74
14
84
34
5
11
47
1.63
1532579--1532909
160
2.1
160
98
0
644
31
15
22
31
1.95
1533739--1533824
28
3.2
27
80
9
88
27
8
19
44
1.79
1536004--1536059
14
3.8
14
74
19
51
60
1
0
37
1.07
1536121--1536170
25
2.0
24
92
3
82
60
0
0
40
0.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14

The End!