Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold501
Parameters: 2 7 7 80 10 50 1000
Length:  850550

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 622 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
819781--820699
116
8.2
111
85
6
1158
22
20
28
28
1.99
819781--821932
714
3.0
708
85
8
2600
23
20
29
26
1.99
820715--821928
397
3.1
393
82
10
1473
24
20
28
26
1.99
821279--821670
216
1.8
216
87
5
596
27
19
28
25
1.99
821483--821933
60
7.6
59
87
6
580
26
19
29
25
1.99
828028--828346
80
4.0
78
81
8
349
31
14
27
26
1.95
828028--828346
160
2.0
159
84
8
416
31
14
27
26
1.95
828299--828373
27
2.7
27
89
6
107
21
20
33
25
1.97
828217--828421
107
1.9
109
82
6
256
28
16
27
27
1.97
828353--828634
52
5.4
52
90
3
410
32
12
27
27
1.93
830998--831023
13
2.0
13
100
0
52
38
15
15
30
1.88
831075--831160
19
4.7
19
72
20
76
37
16
12
33
1.87
831067--831139
32
2.3
32
95
0
128
35
16
13
34
1.88
831094--831118
13
1.9
13
100
0
50
32
16
16
36
1.90
831196--831253
21
2.7
22
81
7
75
32
15
15
36
1.89
831837--831883
2
23.5
2
95
0
85
53
0
0
46
1.00
842292--842659
183
2.0
183
92
0
610
38
13
15
33
1.86
842689--842739
20
2.6
20
84
3
68
31
15
13
39
1.87
842786--842815
13
2.3
13
100
0
60
33
16
13
36
1.88
845155--845192
20
1.9
20
100
0
76
36
23
7
31
1.84
845844--846271
97
4.4
97
89
0
667
28
27
13
31
1.94
845844--846271
194
2.2
194
94
0
766
28
27
13
31
1.94

Tables:   1   2   3   4   5   6

The End!