Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold513
Parameters: 2 7 7 80 10 50 1000
Length:  613464

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 487 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
596154--602180
951
6.4
950
89
1
8753
30
18
15
35
1.92
601086--602180
476
2.3
474
89
0
1636
30
18
15
35
1.92
601086--602401
476
2.8
474
83
3
1240
30
18
15
35
1.92
601857--602543
317
2.2
314
83
3
869
30
19
16
33
1.94
602183--613464
475
23.8
475
88
2
16158
29
19
15
35
1.92
601392--603180
791
2.3
789
84
5
2175
30
19
15
35
1.92
601090--613188
158
76.5
157
66
12
3955
29
19
15
35
1.92

Tables:   1   2   3   4   5

The End!