Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168337.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_56, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  149304

Tables:   1   2   3   4   

This is table  4  of  4  ( 405 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139488--139561
35
2.2
33
80
9
78
51
1
2
44
1.24
139609--139701
42
2.2
42
98
0
177
43
7
6
43
1.58
139795--139869
23
3.2
23
74
12
64
52
2
2
42
1.29
139842--139899
30
1.9
30
82
10
73
43
1
5
50
1.35
139935--139974
19
2.0
21
90
9
66
45
0
0
55
0.99
140131--140192
9
6.4
9
74
20
54
58
0
0
41
0.98
140131--140190
21
2.8
20
75
22
59
58
0
0
41
0.98
140118--140192
28
2.7
30
84
14
106
54
0
0
45
0.99
140133--140184
16
3.1
17
78
15
63
59
0
0
40
0.97
140693--140742
26
1.9
27
88
8
77
58
4
2
36
1.29
140738--140776
20
2.0
20
89
0
60
51
0
0
48
1.00
141146--141470
181
1.8
180
79
8
383
39
8
8
43
1.67
141905--141968
29
2.2
29
80
0
74
48
0
0
51
1.00
141958--141992
16
2.1
17
89
5
54
60
0
0
40
0.97
142128--142175
19
2.5
20
76
13
55
47
0
2
50
1.12
142994--143028
16
2.3
15
90
5
52
54
2
5
37
1.39
143161--143205
14
3.1
14
81
12
56
44
0
0
55
0.99
143147--143205
29
2.1
28
84
9
75
50
0
0
49
1.00
143917--143974
20
3.1
19
79
13
57
50
3
0
46
1.18
144132--144202
32
2.2
33
84
2
99
57
0
5
36
1.22
145007--145039
13
2.6
13
90
4
50
57
3
6
33
1.38
145664--145708
22
2.0
22
86
0
63
53
2
0
44
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145906--145930
13
1.9
13
100
0
50
48
4
0
48
1.20
145956--146000
24
2.0
22
82
8
54
53
2
0
44
1.13
145958--146022
25
2.4
27
80
14
73
50
1
1
46
1.20
145996--146042
23
2.0
23
84
8
60
48
0
2
48
1.13
146152--146576
176
2.4
175
76
8
394
44
9
7
39
1.65
146602--146650
18
2.8
18
72
25
50
57
2
2
38
1.22
146585--146652
27
2.4
28
73
11
68
58
2
1
36
1.22
146587--146653
26
2.6
27
72
13
68
58
2
1
37
1.23
146643--146692
23
2.1
25
85
7
68
52
0
2
46
1.12
146672--146721
24
2.0
26
85
14
70
42
2
0
56
1.11
146795--146833
17
2.4
17
91
4
62
56
0
0
43
0.99
146883--147304
180
2.3
180
78
6
415
37
8
9
44
1.68
147646--147680
8
4.2
8
96
3
61
48
0
0
51
1.00
147922--147992
16
4.5
17
68
22
57
50
1
1
46
1.18
148052--148110
21
3.0
21
74
20
65
54
1
1
42
1.20
148205--148254
24
2.1
22
85
14
64
52
0
4
44
1.20
148277--148330
15
3.7
15
76
13
60
44
0
0
55
0.99
148468--148531
8
7.6
8
77
11
58
35
3
1
59
1.23
148377--148529
34
4.3
34
68
22
86
42
3
0
53
1.22
148840--148879
14
2.8
15
81
14
57
45
0
0
55
0.99
148850--148900
18
2.7
19
78
6
59
43
0
0
56
0.99
148880--148951
29
2.5
30
80
12
80
50
0
1
48
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
149173--149216
9
5.0
9
86
5
54
47
0
0
52
1.00

Tables:   1   2   3   4

The End!