Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold62
Parameters: 2 7 7 80 10 50 1000
Length:  1680050

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 510 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1560994--1561029
19
2.0
17
89
10
54
27
0
11
61
1.30
1575890--1575973
43
2.0
43
92
0
141
26
17
25
30
1.97
1576267--1576311
21
2.1
21
84
8
56
0
28
22
48
1.50
1577283--1577351
34
2.0
34
100
0
138
17
20
11
50
1.76
1582069--1582138
31
2.2
32
85
10
90
50
4
7
38
1.50
1582069--1582138
33
2.1
33
87
10
99
50
4
7
38
1.50
1585608--1585642
17
2.1
17
94
0
61
51
5
8
34
1.56
1588347--1588376
14
2.1
14
93
0
51
20
13
13
53
1.72
1588561--1588594
12
3.0
12
87
12
54
64
0
0
35
0.94
1592283--1592327
3
14.3
3
86
9
63
28
2
4
64
1.25
1592472--1592526
24
2.2
24
83
3
74
41
5
1
50
1.36
1599593--1599638
21
2.1
22
88
11
69
30
0
43
26
1.55
1599721--1599779
30
2.0
29
90
3
91
38
0
40
20
1.53
1602029--1602085
29
1.9
30
86
10
82
26
10
7
56
1.59
1604316--1604411
47
2.0
47
93
0
165
46
12
14
26
1.80
1613063--1613097
6
5.8
6
93
0
61
14
31
2
51
1.57
1613064--1613103
12
3.3
12
92
0
62
10
30
5
55
1.54
1625978--1626105
39
3.2
39
78
7
150
42
19
5
32
1.74
1628998--1629041
21
2.1
21
100
0
88
29
13
4
52
1.60
1636256--1636281
11
2.4
11
100
0
52
38
7
0
53
1.30
1636402--1636473
30
2.5
30
70
4
76
43
4
1
51
1.29
1637060--1637140
35
2.3
36
91
4
137
27
29
25
17
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1638030--1638084
25
2.2
25
77
6
58
34
1
5
58
1.32
1638442--1638497
29
1.9
29
89
7
87
39
7
12
41
1.70
1664742--1664805
28
2.3
28
80
0
74
39
17
10
32
1.84
1670089--1670247
37
4.3
37
81
0
174
35
18
20
24
1.95
1670089--1670247
74
2.1
74
83
0
192
35
18
20
24
1.95
1674065--1674103
9
4.4
9
80
6
53
48
0
2
48
1.15
1679730--1679955
42
5.4
42
92
1
346
26
22
23
28
1.99
1679684--1679955
84
3.2
82
84
9
327
26
22
23
28
1.99

Tables:   1   2   3   4   5

The End!