Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold216
Parameters: 2 7 7 80 10 50 1000
Length:  960516

Tables:   1   2   3   4   

This is table  4  of  4  ( 379 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
912090--912134
19
2.2
21
88
7
67
62
6
2
28
1.33
912220--912253
17
2.0
17
88
0
50
67
0
11
20
1.21
912378--912425
10
4.8
10
77
10
53
31
6
0
62
1.20
912281--912411
19
6.7
19
67
18
56
29
9
0
60
1.33
912372--912423
19
2.8
18
81
18
54
30
7
0
61
1.24
912934--912976
22
2.0
22
81
9
52
37
13
2
46
1.57
922742--923009
42
6.3
42
92
1
428
35
22
17
23
1.95
922742--923009
85
3.2
85
92
2
450
35
22
17
23
1.95
922732--923009
127
2.2
127
90
1
432
36
22
17
23
1.95
932482--932577
25
3.8
25
80
10
115
33
2
19
44
1.63
932487--932776
9
33.3
9
74
12
234
33
1
18
45
1.60
936614--936702
44
2.0
44
88
2
133
49
25
5
19
1.70
936390--937003
325
1.9
325
99
0
1219
50
17
13
18
1.77
939942--940330
114
3.4
113
77
5
435
28
20
15
34
1.94
939888--940274
113
3.4
114
78
6
462
27
20
17
34
1.95
939854--940330
227
2.1
227
92
1
787
28
21
15
34
1.94
954238--954263
13
2.0
13
100
0
52
23
7
15
53
1.67
954332--954407
29
2.6
29
85
0
107
55
13
3
27
1.55
955281--955322
16
2.6
16
81
7
50
33
2
0
64
1.07

Tables:   1   2   3   4

The End!