Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold287
Parameters: 2 7 7 80 10 50 1000
Length:  1864789

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 730 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1778837--1778963
40
3.2
40
80
3
132
18
25
20
36
1.95
1784313--1784380
33
2.1
33
100
0
136
29
20
23
26
1.99
1789516--1789576
25
2.4
25
81
5
70
39
1
1
57
1.18
1794803--1795047
122
2.0
123
99
0
483
34
18
7
39
1.79
1796190--1796258
25
2.8
25
88
4
95
31
20
18
28
1.96
1798772--1798807
17
2.1
17
94
0
63
25
5
19
50
1.69
1802097--1802282
67
2.7
67
79
9
166
33
17
25
23
1.96
1827558--1827590
7
4.7
7
100
0
66
60
0
0
39
0.97
1828709--1828769
27
2.3
27
97
2
115
29
19
13
37
1.90
1856222--1864789
194
44.2
194
87
1
9188
32
19
15
27
1.91

Tables:   1   2   3   4   5   6   7

The End!