Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001497.1 Hibiscus syriacus cultivar Beakdansim tig00002919_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1780709

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 861 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1715121--1715249
20
6.4
20
76
4
118
44
18
17
20
1.87
1715154--1715264
20
5.6
20
79
4
125
45
14
16
24
1.84
1715147--1715271
40
3.1
40
90
0
187
44
16
16
22
1.86
1715497--1715558
20
3.1
20
79
9
81
50
16
11
22
1.76
1715470--1715565
40
2.4
40
82
0
120
45
15
14
23
1.83
1715686--1715737
20
2.6
20
78
0
59
40
21
19
19
1.92
1726535--1726564
2
15.0
2
100
0
60
50
0
0
50
1.00
1731530--1731557
12
2.3
12
100
0
56
64
0
0
35
0.94
1731982--1732025
21
2.2
20
83
4
52
56
2
0
40
1.11
1731979--1732347
184
2.0
183
91
3
600
42
3
7
46
1.49
1735083--1735132
20
2.4
22
83
10
68
34
24
6
36
1.80
1743005--1743037
16
2.1
17
88
11
52
48
3
0
48
1.17
1745576--1745669
31
3.2
31
66
22
83
24
18
12
44
1.84
1745571--1745686
58
2.0
58
98
0
223
25
17
12
43
1.84
1746056--1746115
2
31.0
2
80
6
52
53
5
0
41
1.23
1746048--1746093
23
2.0
23
95
4
83
65
4
0
30
1.12
1759449--1759503
16
3.4
16
79
0
65
56
21
12
9
1.64
1761739--1761812
30
2.5
30
82
2
78
41
22
8
27
1.82
1762122--1762165
23
1.9
23
86
9
63
68
2
0
29
1.02
1762348--1762409
29
2.1
30
82
8
74
32
9
19
38
1.84
1762588--1762628
22
2.0
21
85
9
57
36
0
0
63
0.95

Tables:   1   2   3   4   5   6   7   8

The End!