Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003208.1 Hibiscus syriacus cultivar Beakdansim tig00006753_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1278004

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 729 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1263836--1263990
81
1.9
81
81
2
186
23
20
24
31
1.98
1264040--1264080
21
2.0
21
85
0
55
34
31
17
17
1.93
1264279--1264342
29
2.2
30
85
2
85
17
7
14
60
1.56
1265343--1265987
182
3.6
181
87
3
876
41
12
18
27
1.87
1267127--1267319
106
1.8
107
85
3
273
41
12
16
29
1.85
1267227--1267704
197
2.4
197
80
5
527
38
13
15
32
1.87
1267699--1267860
87
1.9
87
90
0
261
33
14
10
41
1.80
1272004--1273275
228
5.6
226
82
4
1200
22
24
21
31
1.98
1277174--1277220
20
2.4
18
78
21
51
70
4
0
25
1.05

Tables:   1   2   3   4   5   6   7

The End!