Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000480.1 Hibiscus syriacus cultivar Beakdansim tig00000910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  869251

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 492 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
823781--823824
23
1.9
23
95
0
79
22
25
27
25
2.00
829343--829381
19
2.1
19
100
0
78
20
25
12
41
1.88
830811--830991
65
2.8
64
76
17
187
27
18
24
29
1.98
830832--831032
65
3.1
64
78
14
216
26
18
23
30
1.98
839244--839306
33
1.9
33
83
6
83
46
7
17
28
1.76
843284--843308
8
3.1
8
100
0
50
48
52
0
0
1.00
847797--847918
49
2.5
48
77
5
127
6
21
18
54
1.66
851362--851567
63
3.3
63
98
0
394
27
15
20
36
1.93
855917--855951
18
1.9
18
88
0
52
20
14
8
57
1.63
859493--859560
29
2.3
29
97
0
127
60
2
14
22
1.48
862608--862638
15
2.1
15
100
0
62
32
9
32
25
1.88
865911--865947
18
2.1
18
100
0
74
10
8
32
48
1.67

Tables:   1   2   3   4   5

The End!