Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006573.1 Hibiscus syriacus cultivar Beakdansim tig00016106_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1218788

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 727 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1193627--1193669
21
2.1
21
82
4
52
20
13
30
34
1.92
1193702--1193755
21
2.5
22
82
11
67
42
18
12
25
1.86
1197776--1197814
21
1.9
19
85
10
51
23
10
30
35
1.88
1207960--1207984
13
1.9
13
100
0
50
72
0
12
16
1.13
1211704--1211758
24
2.3
24
100
0
110
10
25
27
36
1.89
1216823--1216858
18
2.0
18
94
0
63
19
22
27
30
1.98
1216828--1216865
18
2.1
18
90
0
58
18
18
28
34
1.95

Tables:   1   2   3   4   5   6   7

The End!