Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007113.1 Hibiscus syriacus cultivar Beakdansim tig00018586_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  836039

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 495 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
781036--781079
9
4.6
10
78
21
58
72
9
2
15
1.19
781036--781079
19
2.3
19
92
0
70
72
9
2
15
1.19
783049--783107
31
1.9
31
92
0
100
42
18
15
23
1.88
787309--787873
284
2.0
284
96
0
1040
35
24
16
22
1.95
795603--795908
150
2.0
150
95
0
551
27
16
20
35
1.94
795887--795930
23
1.9
23
85
0
61
22
27
22
27
1.99
802638--802941
150
2.0
150
95
0
547
27
16
20
35
1.94
809666--809969
150
2.0
150
95
0
547
26
16
21
35
1.95
812084--812112
14
2.1
14
100
0
58
48
0
13
37
1.43
813742--813814
29
2.6
29
93
4
123
41
8
17
32
1.79
818595--818624
14
2.1
15
93
6
53
20
20
0
60
1.37
821083--821132
20
2.5
20
90
0
73
36
12
20
32
1.89
821099--821139
20
2.0
20
85
0
55
34
14
19
31
1.92
823823--823881
21
2.9
21
78
14
70
35
6
23
33
1.82
835849--835912
26
2.5
26
89
0
92
34
10
25
29
1.90

Tables:   1   2   3   4   5

The End!