Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007844.1 Hibiscus syriacus cultivar Beakdansim tig00110198_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2094103

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 732 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2089041--2089078
6
6.5
6
96
3
69
31
52
15
0
1.43
2089823--2089861
6
6.5
6
100
0
78
0
15
51
33
1.44
2089972--2090101
20
6.4
20
78
8
129
16
20
24
37
1.93
2089972--2090079
40
2.7
40
92
0
180
16
22
23
37
1.93
2089985--2090105
60
2.0
62
88
6
185
17
21
23
38
1.93
2089985--2090163
20
8.9
19
74
12
112
17
20
21
40
1.91
2090880--2090938
29
2.0
29
93
0
100
30
20
11
37
1.89
2090915--2090986
21
3.5
21
77
3
76
23
22
22
31
1.98
2091060--2091089
6
4.8
6
95
4
51
33
46
16
3
1.64
2091812--2091925
21
5.4
21
70
15
101
34
22
21
21
1.97
2091798--2091934
42
3.3
42
95
0
247
35
19
21
23
1.96
2091793--2091976
84
2.2
86
78
9
218
33
19
22
24
1.97

Tables:   1   2   3   4   5   6   7

The End!