Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008100.1 Hibiscus syriacus cultivar Beakdansim tig00110630_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1372717

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 729 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1294058--1294106
21
2.3
21
100
0
98
28
4
30
36
1.76
1296011--1296044
16
2.1
17
88
5
52
38
2
17
41
1.65
1300891--1301014
53
2.3
53
85
0
158
31
18
20
29
1.97
1303102--1303140
21
1.9
20
85
15
53
38
17
12
30
1.88
1311124--1311154
16
2.0
15
93
6
53
38
16
25
19
1.92
1310929--1311338
209
1.9
211
98
1
797
34
20
16
28
1.95
1337389--1337501
34
3.2
35
83
5
147
31
20
21
26
1.98
1341740--1342011
131
2.1
132
95
1
483
28
4
17
50
1.64
1347125--1347257
34
3.9
34
84
4
169
31
19
21
27
1.97

Tables:   1   2   3   4   5   6   7

The End!