Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008226.1 Hibiscus syriacus cultivar Beakdansim tig00110860_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  835745

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 494 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
782235--782293
32
1.9
32
86
6
86
32
16
18
32
1.94
782841--782872
12
2.4
14
90
10
50
53
3
40
3
1.33
784901--784952
24
2.2
24
96
0
95
53
11
19
15
1.71
796495--796528
12
2.8
12
100
0
68
41
8
8
41
1.67
797280--797323
21
2.1
21
86
0
61
36
15
38
9
1.80
803139--803178
21
1.9
21
85
10
55
35
10
2
52
1.48
805350--805389
20
2.0
21
85
14
57
45
7
5
42
1.54
809152--809238
35
2.5
34
78
12
88
54
10
9
26
1.64
812646--812694
24
2.0
24
84
7
64
48
0
2
48
1.12
813587--813630
22
2.0
22
86
0
61
40
2
2
54
1.25
819783--819866
37
2.3
37
89
6
127
36
2
17
42
1.63
831795--831835
22
1.9
21
85
5
55
46
4
12
36
1.63
833095--833147
16
3.5
15
77
7
54
54
0
0
45
0.99
834462--834506
18
2.6
18
96
3
83
42
17
13
26
1.86

Tables:   1   2   3   4   5

The End!