Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008290.1 Hibiscus syriacus cultivar Beakdansim tig00110954_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1890093

Tables:   1   2   3   4   5   6   7   8   9   

This is table  9  of  9  ( 972 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1854686--1854767
19
4.5
19
73
18
68
40
0
1
58
1.06
1858497--1858596
39
2.6
39
81
0
119
28
27
28
17
1.97
1867270--1867294
2
12.5
2
100
0
50
48
0
0
52
1.00
1868954--1869009
21
2.8
20
86
10
78
25
37
14
23
1.92
1870737--1870796
24
2.5
24
83
8
68
68
0
6
25
1.14
1872377--1872459
21
4.0
21
75
0
76
30
14
3
51
1.59
1872949--1873001
13
4.2
13
82
2
54
30
0
0
69
0.88
1872954--1873005
3
17.7
3
84
15
65
32
0
0
67
0.91
1872967--1873008
10
4.3
10
93
6
77
38
0
0
61
0.96
1872965--1873018
19
3.0
19
82
12
62
37
1
0
61
1.07
1886453--1886495
15
2.9
15
85
0
59
76
0
16
6
0.99
1887435--1887734
140
2.2
134
82
9
346
27
27
19
25
1.99

Tables:   1   2   3   4   5   6   7   8   9

The End!