Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008419.1 Hibiscus syriacus cultivar Beakdansim tig00111199_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1038719

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1006516--1006661
62
2.4
63
80
11
176
32
20
17
29
1.96
1007302--1007373
29
2.4
30
86
2
92
19
20
30
29
1.97
1009411--1009453
20
2.2
20
86
0
59
30
13
20
34
1.92
1026458--1026631
49
3.5
48
83
5
206
24
12
15
47
1.80
1028590--1028630
22
2.0
22
85
9
59
43
17
19
19
1.88

Tables:   1   2   3   4   5

The End!