Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008430.1 Hibiscus syriacus cultivar Beakdansim tig00111220_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1186098

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 614 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1161543--1161580
2
19.0
2
100
0
76
50
0
0
50
1.00
1168258--1168324
22
3.0
22
95
2
116
25
28
26
19
1.99
1170000--1170044
21
2.1
21
87
0
63
15
24
28
31
1.96
1173168--1173234
22
3.0
22
95
2
116
25
28
26
19
1.99
1174906--1174950
21
2.1
21
87
0
63
15
24
28
31
1.96
1178385--1178423
18
2.2
18
90
0
60
33
30
25
10
1.89
1178687--1178752
16
4.1
16
75
14
64
22
1
24
51
1.57
1178992--1179072
25
3.6
25
67
25
79
34
0
39
25
1.56
1179006--1179071
21
3.4
17
68
28
51
33
0
39
27
1.57
1179000--1179084
42
2.0
42
100
0
170
34
0
40
25
1.56
1179000--1179063
21
3.0
21
64
31
55
34
0
37
28
1.57
1179017--1179085
21
3.3
21
67
28
65
31
0
46
21
1.52
1182890--1182968
6
13.2
6
81
5
79
35
3
1
59
1.24
1182921--1182968
9
5.3
9
97
0
78
33
6
0
60
1.22

Tables:   1   2   3   4   5   6

The End!