Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008662.1 Hibiscus syriacus cultivar Beakdansim tig00111662_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1703488

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 848 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1665674--1665744
29
2.6
27
77
14
74
69
7
16
7
1.34
1667404--1667559
31
5.0
31
94
1
260
19
19
22
37
1.94
1671039--1671073
18
1.9
18
100
0
70
11
28
34
25
1.91
1671966--1672119
62
2.5
62
91
2
229
20
19
21
38
1.93
1671964--1672103
31
4.5
31
94
0
244
19
20
20
40
1.92
1680065--1680120
24
2.3
24
93
0
94
39
7
7
46
1.59
1694648--1694683
17
2.1
18
94
5
65
16
27
0
55
1.42
1696135--1696297
88
1.9
88
88
2
247
24
19
23
33
1.97

Tables:   1   2   3   4   5   6   7   8

The End!