Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008676.1 Hibiscus syriacus cultivar Beakdansim tig00111693_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  957917

Tables:   1   2   3   4   

This is table  4  of  4  ( 379 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
906622--906936
149
2.1
149
98
1
605
32
21
18
26
1.97
907825--907859
18
1.9
18
88
11
54
22
17
5
54
1.64
908440--908484
21
2.1
21
87
0
63
15
24
28
31
1.96
911678--911722
23
2.0
23
90
0
72
24
26
26
22
2.00
911698--912004
149
2.1
149
98
0
587
33
21
17
27
1.95
912896--912930
18
1.9
18
88
11
54
22
17
5
54
1.64
913511--913553
21
2.0
21
86
0
59
16
25
27
30
1.97
921152--921243
29
3.0
29
68
25
80
22
17
16
43
1.87
925800--926213
211
2.0
205
95
2
738
36
17
24
21
1.95
940922--941296
184
2.0
184
91
2
610
42
2
9
45
1.51
942073--942167
21
4.6
21
77
2
93
18
18
26
35
1.95
942069--942146
41
1.9
41
86
5
113
19
19
24
37
1.94
942216--942465
41
6.0
41
82
7
301
36
22
20
20
1.95
942368--942440
20
3.6
20
75
3
83
39
27
21
10
1.87
942241--942469
21
11.1
21
65
10
96
36
24
19
20
1.95
944038--944114
12
6.8
12
77
16
67
53
7
3
35
1.48
944609--944734
63
2.0
63
93
0
216
36
17
22
23
1.95
945682--945739
2
30.5
2
79
10
68
51
0
1
46
1.11
946086--946949
105
8.2
104
93
2
1410
21
18
26
33
1.96

Tables:   1   2   3   4

The End!