Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009064.1 Hibiscus syriacus cultivar Beakdansim tig00112487_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  748991

Tables:   1   2   3   4   

This is table  4  of  4  ( 376 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728618--728707
14
5.7
14
74
23
81
42
23
25
8
1.83
728611--728724
33
3.5
33
93
1
203
44
21
24
9
1.82
728614--728729
19
6.9
18
72
24
94
43
21
25
10
1.84
728741--728795
14
3.6
14
73
21
56
9
25
23
41
1.83
728725--728795
33
2.2
33
94
0
124
8
22
25
43
1.81
728736--728817
33
2.5
33
89
2
119
9
25
21
42
1.84
728748--728836
20
4.8
20
72
19
75
12
24
19
43
1.85
728916--728984
33
2.2
32
89
5
104
47
18
21
11
1.80
729165--729219
22
2.5
22
81
0
74
20
16
40
23
1.91
729363--729536
20
8.6
20
83
5
217
19
19
26
34
1.96
729365--729555
60
3.2
60
83
0
247
19
19
25
35
1.95
729611--729662
20
2.6
20
96
0
95
21
13
26
38
1.90
734517--734579
14
4.5
14
69
21
51
39
9
3
47
1.52
734510--734596
42
2.1
42
100
0
174
44
9
2
43
1.48
734905--734942
19
2.0
19
100
0
76
47
10
15
26
1.78
743374--743400
13
2.1
13
100
0
54
22
25
14
37
1.93

Tables:   1   2   3   4

The End!