Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009234.1 Hibiscus syriacus cultivar Beakdansim tig00112856_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  912649

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 489 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
885407--885479
3
24.0
3
83
2
92
58
0
0
41
0.98
885743--886516
113
6.8
113
94
0
1140
29
18
13
37
1.90
887305--887809
83
6.1
83
94
0
866
37
22
13
26
1.92
888966--889009
9
4.9
9
82
0
61
0
15
0
84
0.63
888966--889019
19
2.8
19
86
5
74
0
20
0
79
0.73
900360--900406
15
3.3
15
80
14
55
59
0
2
38
1.09
901284--901325
15
2.9
14
89
7
57
0
21
2
76
0.90
901284--901325
20
2.1
20
86
8
59
0
21
2
76
0.90
901757--901838
3
27.0
3
82
2
101
59
1
0
39
1.05

Tables:   1   2   3   4   5

The End!