Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009289.1 Hibiscus syriacus cultivar Beakdansim tig00112988_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1661737

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 855 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1591504--1591552
21
2.4
20
79
3
53
16
20
36
26
1.93
1595088--1595380
93
3.2
93
86
2
392
23
27
20
28
1.99
1608375--1608420
20
2.3
20
85
7
58
58
0
4
36
1.18
1608739--1608853
58
2.0
57
81
10
135
43
2
18
35
1.64
1609201--1609290
42
2.1
43
83
6
121
56
1
1
41
1.14
1609169--1609325
36
4.7
32
74
14
104
55
1
0
42
1.12
1609263--1609333
25
2.8
25
79
10
72
54
1
0
43
1.08
1609243--1609301
17
3.4
17
76
15
66
54
1
1
42
1.20
1613308--1613336
3
9.7
3
100
0
58
31
0
34
34
1.58
1617237--1617297
25
2.4
25
86
5
79
34
11
9
44
1.74
1619831--1619879
23
2.1
23
81
11
55
36
2
4
57
1.30
1626334--1626433
52
1.9
53
93
2
175
34
19
18
29
1.95
1630885--1631256
123
3.0
124
98
1
714
28
10
23
37
1.88
1645872--1645904
17
2.0
17
94
5
59
60
6
3
30
1.36
1655734--1655793
2
30.0
2
100
0
120
50
0
0
50
1.00

Tables:   1   2   3   4   5   6   7   8

The End!