Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014898.1 Kokia drynarioides strain JFW-HI SEQ_129941, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1273188

Tables:   1   2   3   4   

This is table  4  of  4  ( 382 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1152856--1152891
13
2.8
13
91
4
56
19
0
19
61
1.35
1154872--1154913
21
2.0
21
100
0
84
23
19
23
33
1.97
1160024--1160052
12
2.3
13
94
5
51
34
3
10
51
1.53
1170826--1170875
17
2.9
17
93
0
82
44
12
26
18
1.84
1177699--1177745
17
2.8
17
75
12
51
17
14
12
55
1.70
1194864--1194910
21
2.2
21
88
0
67
6
34
10
48
1.63
1194881--1194945
18
3.6
18
87
0
94
9
30
9
50
1.65
1215942--1215980
18
2.3
17
83
12
53
17
23
10
48
1.78
1219816--1219863
20
2.4
20
78
0
51
18
16
6
58
1.59
1223409--1223453
18
2.6
17
83
13
56
28
0
2
68
1.01
1235469--1235498
14
2.1
14
100
0
60
73
0
6
20
1.05
1235489--1235521
11
3.0
11
90
0
57
63
3
0
33
1.10
1237351--1237664
28
11.5
28
76
6
259
20
25
14
39
1.90
1237474--1237555
24
3.2
24
75
12
83
19
25
15
39
1.91
1237351--1237695
188
1.8
188
83
2
451
19
25
15
39
1.91
1243375--1243413
3
13.0
3
84
10
53
0
30
0
69
0.89
1243375--1243419
15
2.9
16
83
12
58
0
31
2
66
1.04
1248839--1248944
54
2.0
54
96
0
194
40
20
21
16
1.91
1272772--1273081
28
11.5
28
71
10
108
21
26
14
37
1.92
1272769--1273133
80
4.6
80
81
3
340
20
25
14
38
1.91
1272804--1273121
160
2.0
159
85
2
422
21
25
14
38
1.91
1272877--1273138
52
5.0
52
73
12
151
20
26
15
37
1.92

Tables:   1   2   3   4

The End!