Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015354.1 Kokia drynarioides strain JFW-HI SEQ_130401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1324750

Tables:   1   2   3   4   

This is table  4  of  4  ( 371 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1302575--1302804
114
2.0
114
96
0
424
38
16
10
34
1.84
1302756--1302915
75
2.1
75
94
1
277
54
15
2
28
1.54
1304641--1304682
16
2.5
17
88
7
59
71
4
2
21
1.16
1306162--1306205
3
14.7
3
100
0
88
68
0
0
31
0.90
1310107--1310141
18
1.9
18
88
0
52
48
8
0
42
1.33
1310071--1310302
51
4.6
51
68
17
142
43
10
3
42
1.57
1310015--1310425
151
2.7
151
84
7
517
41
9
4
43
1.58
1310315--1310374
29
2.1
28
81
9
68
31
6
1
60
1.33
1310854--1310898
3
15.0
3
95
0
81
64
0
2
33
1.06
1310924--1310948
11
2.3
11
100
0
50
84
0
8
8
0.79
1311274--1311387
42
2.7
42
90
2
176
40
23
16
19
1.91

Tables:   1   2   3   4

The End!