Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold137
Parameters: 2 7 7 80 10 50 1000
Length:  675198

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 512 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
648731--648765
18
1.9
18
88
0
52
65
0
0
34
0.93
649247--649291
6
7.3
6
83
14
56
62
0
0
37
0.96
649312--649363
14
3.9
14
78
9
56
44
0
0
55
0.99
650055--650101
21
2.3
21
81
3
60
59
4
0
36
1.17
652504--652539
7
5.3
7
93
3
56
47
0
0
52
1.00
654020--654089
2
35.0
2
82
0
86
47
4
2
45
1.37
654607--654638
16
2.0
17
88
11
50
59
0
0
40
0.97
655327--655360
17
2.0
17
94
0
59
38
0
0
61
0.96
655331--655436
44
2.4
46
73
7
103
41
1
0
55
1.17
655462--655528
22
3.0
22
70
10
55
59
0
1
38
1.06
656031--656112
34
2.3
36
81
8
98
43
0
0
56
0.99
656025--656073
21
2.3
22
83
16
68
38
0
0
61
0.96
656031--656095
10
6.1
11
69
24
50
41
0
0
58
0.98
656034--656109
21
3.5
22
74
20
54
44
0
0
55
0.99
655998--656094
18
5.2
20
66
22
59
43
0
0
56
0.99
657110--657170
23
2.6
23
79
10
61
50
0
0
49
1.00
658062--658103
20
2.2
20
82
4
50
76
2
2
19
1.01
658178--658222
14
3.1
14
77
3
54
46
0
0
53
1.00
658292--658317
12
2.2
12
100
0
52
53
0
0
46
1.00
658353--658417
23
2.8
23
68
9
60
46
0
0
53
1.00
660335--660372
18
2.1
18
85
9
51
36
0
0
63
0.95
660387--660424
6
6.2
6
85
14
51
39
0
0
60
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660341--660422
17
4.4
19
73
22
59
37
1
1
59
1.13
660499--660596
40
2.4
40
91
1
151
31
9
7
52
1.60
669559--669594
16
2.3
15
90
4
54
47
2
2
47
1.31
670329--670376
17
2.7
17
87
12
62
43
0
0
56
0.99
670969--671010
19
2.1
19
86
8
57
61
2
2
33
1.21
670997--671029
14
2.4
14
90
5
50
69
0
0
30
0.88
670975--671034
23
2.8
21
82
12
61
66
0
0
33
0.92
672164--672196
3
11.0
3
100
0
66
0
33
0
66
0.92
673305--673334
15
2.1
14
93
6
51
63
6
0
30
1.20
674019--674065
24
2.0
24
87
8
69
51
2
2
44
1.25

Tables:   1   2   3   4   5

The End!