Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold227
Parameters: 2 7 7 80 10 50 1000
Length:  617646

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 505 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595441--595520
35
2.2
38
80
19
98
48
3
1
46
1.28
595410--595684
111
2.4
113
84
4
342
41
2
3
52
1.32
596121--596191
15
4.9
15
72
16
60
43
2
5
47
1.41
596122--596190
7
9.6
7
72
10
50
44
2
4
47
1.37
596465--596614
75
2.0
75
96
1
275
49
3
9
38
1.52
596596--596652
30
1.9
30
86
13
82
56
0
1
42
1.10
598367--598457
38
2.4
38
92
0
155
45
6
17
30
1.74
598544--598625
41
2.0
41
85
0
110
28
24
9
37
1.87
601076--601114
20
2.0
20
84
0
51
41
0
0
58
0.98
601177--601229
22
2.4
23
81
9
65
50
1
0
47
1.12
601497--601644
79
1.9
79
91
2
244
20
23
10
44
1.83
602509--602542
2
17.0
2
100
0
68
50
0
0
50
1.00
606522--606548
2
13.5
2
100
0
54
48
0
0
51
1.00
609476--609597
21
6.1
21
66
20
57
22
0
37
39
1.55
609623--609676
14
3.7
15
82
7
67
12
1
44
40
1.54
609388--609572
7
26.7
7
67
14
89
18
2
38
40
1.63
609685--609736
21
2.5
20
84
3
59
25
5
28
40
1.78
610593--610633
20
2.0
22
85
9
59
73
0
17
9
1.09
610733--610791
22
2.8
21
80
14
59
35
15
11
37
1.84
611119--611178
31
1.9
31
83
6
77
26
1
30
41
1.65
611269--611336
21
3.3
20
69
22
52
32
0
23
44
1.54
612203--612245
15
2.9
15
82
10
52
13
0
39
46
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
612254--612323
36
2.0
35
82
2
86
32
1
24
41
1.64
614101--614206
53
2.0
53
87
3
151
34
28
16
20
1.94
614450--614485
15
2.4
15
90
0
54
61
0
0
38
0.96

Tables:   1   2   3   4   5

The End!