Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold231
Parameters: 2 7 7 80 10 50 1000
Length:  1009718

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 735 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
992482--992540
28
2.1
28
83
0
73
37
20
5
37
1.75
994139--994176
2
19.0
2
94
0
58
0
5
44
50
1.24
994379--994404
2
13.0
2
100
0
52
0
0
50
50
1.00
993960--994578
228
2.8
222
84
7
771
36
15
20
27
1.93
994622--994647
2
13.0
2
100
0
52
50
50
0
0
1.00
997558--997638
16
5.1
16
75
20
64
39
1
3
55
1.25
998413--998437
2
12.5
2
100
0
50
48
0
0
52
1.00
999917--999951
2
17.5
2
93
0
52
51
5
0
42
1.25
1000176--1000211
17
2.0
19
89
10
58
66
2
0
30
1.06
1000465--1000499
3
11.7
3
100
0
70
65
0
0
34
0.93
1001018--1001093
33
2.3
32
84
13
93
42
0
0
57
0.98
1001020--1001082
27
2.4
27
80
17
78
39
0
0
60
0.97
1005261--1005317
30
1.9
30
100
0
114
22
19
22
35
1.96
1007179--1007236
6
9.7
6
82
0
71
18
17
29
34
1.94
1007686--1007713
3
9.3
3
100
0
56
32
0
0
67
0.91

Tables:   1   2   3   4   5   6   7

The End!