Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold325
Parameters: 2 7 7 80 10 50 1000
Length:  667817

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 492 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663943--663968
13
2.0
13
100
0
52
38
15
15
30
1.88
663922--663988
33
2.0
33
88
0
98
43
16
14
25
1.86
664008--664074
18
3.9
18
79
20
90
37
14
11
35
1.84
664030--664054
13
1.9
13
100
0
50
32
16
16
36
1.90
664011--664072
31
2.0
32
96
3
117
35
16
12
35
1.87
664130--664186
21
2.7
21
94
0
96
36
21
10
31
1.87
664191--664238
1
48.0
1
93
0
69
4
2
0
93
0.39
664191--664241
19
2.8
19
91
8
81
7
3
0
88
0.63
664835--665679
55
15.3
55
90
4
1237
20
20
31
28
1.97
664835--665680
166
5.1
166
92
2
1339
20
20
30
28
1.97
665436--665522
29
3.2
26
66
22
70
17
18
35
28
1.93
666644--666724
1
81.0
1
85
0
108
0
3
3
92
0.46

Tables:   1   2   3   4   5

The End!