Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold370
Parameters: 2 7 7 80 10 50 1000
Length:  857924

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 617 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
842661--842719
12
5.2
12
80
8
70
79
0
20
0
0.73
843088--843118
10
3.0
10
95
4
53
0
32
0
67
0.91
845502--845554
5
11.4
5
86
9
51
0
15
0
84
0.61
845499--845569
9
8.1
9
81
12
69
2
18
0
78
0.86
845495--845572
4
18.5
4
81
17
52
2
19
0
78
0.87
848448--848514
21
3.2
21
62
29
52
26
26
16
29
1.97
848433--848700
42
6.0
43
80
11
263
25
24
18
31
1.98
848527--848821
49
6.1
49
75
9
264
23
26
17
32
1.96
848477--848700
92
2.5
90
92
2
358
25
24
18
32
1.97
849433--849515
19
4.7
18
75
20
86
32
14
19
33
1.92
849452--849477
13
2.0
13
100
0
52
38
15
15
30
1.88
849433--849495
32
2.0
32
87
6
92
31
15
19
33
1.93
849567--849594
13
2.2
13
100
0
56
28
14
17
39
1.89
850342--850438
19
5.7
19
72
27
92
34
12
18
35
1.88
850343--850440
32
3.0
32
93
1
169
34
12
18
34
1.88
850481--850505
13
1.9
13
100
0
50
32
16
16
36
1.90
850494--850638
52
2.8
53
87
4
197
33
17
17
31
1.93

Tables:   1   2   3   4   5   6

The End!