Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold417
Parameters: 2 7 7 80 10 50 1000
Length:  511691

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 614 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
503784--503826
16
2.6
17
85
10
63
55
0
0
44
0.99
504711--504747
19
2.0
19
85
15
51
70
8
2
18
1.25
504712--504772
22
2.7
22
76
5
68
67
4
3
24
1.26
505368--505419
13
4.2
13
76
20
58
0
28
0
71
0.87
505366--505423
22
2.7
22
76
12
66
0
27
0
72
0.85
505364--505430
23
3.1
21
71
22
59
0
28
0
71
0.86
505861--505921
17
3.6
17
72
12
54
3
16
75
4
1.11
506684--506748
12
5.6
12
70
7
53
30
4
64
0
1.14
507809--507870
11
4.9
13
72
20
51
35
3
8
53
1.47
508231--508295
19
3.2
20
76
14
62
49
0
4
46
1.22
510208--510252
23
1.9
23
86
13
65
4
20
2
73
1.11
510264--510290
4
6.8
4
100
0
54
77
0
0
22
0.76
510586--510672
37
2.4
36
83
11
99
66
0
1
32
0.99
510601--510663
11
5.8
11
75
16
60
73
0
0
26
0.84

Tables:   1   2   3   4   5   6

The End!