Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold793
Parameters: 2 7 7 80 10 50 1000
Length:  691781

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 503 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663445--663484
8
5.5
8
77
22
52
62
0
0
37
0.95
663445--663502
14
4.1
14
90
0
89
58
0
0
41
0.98
663516--663552
15
2.4
15
90
4
56
51
0
0
48
1.00
663477--663573
36
2.6
38
83
11
128
50
0
0
49
1.00
663530--663570
22
1.9
21
90
5
64
51
0
0
48
1.00
664325--664371
12
3.7
12
81
13
58
53
0
0
46
1.00
664351--664403
23
2.2
25
86
6
74
54
0
0
45
0.99
664960--665013
10
5.4
10
78
8
56
38
0
0
61
0.96
664960--665013
20
2.7
19
77
5
63
38
0
0
61
0.96
665182--665215
17
2.0
17
88
0
50
61
2
0
35
1.11
665199--665237
14
2.8
14
84
7
53
56
2
0
41
1.13
666727--666756
2
15.0
2
92
0
51
46
0
0
53
1.00
673064--673096
3
11.0
3
100
0
66
66
0
0
33
0.92
673427--673821
72
5.5
72
76
8
349
31
2
13
52
1.53
676855--676899
21
2.1
21
84
8
56
51
4
22
22
1.66
678703--678733
15
2.1
15
93
0
53
48
16
22
12
1.80
680747--680826
20
3.8
20
75
15
79
26
15
15
43
1.85
680812--680850
13
3.0
13
96
0
69
30
17
15
35
1.91
687128--687202
20
3.8
20
77
7
80
42
12
10
34
1.77
687221--687273
21
2.5
21
96
0
97
32
18
16
32
1.94
688239--688293
19
2.8
19
83
5
65
41
12
14
30
1.83
688236--688292
21
2.8
21
78
5
73
40
12
14
33
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
688324--688394
20
3.5
20
81
14
90
36
12
11
39
1.79

Tables:   1   2   3   4   5

The End!