Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168259.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_49, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  171922

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 574 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
143477--143530
21
2.8
19
81
15
58
57
0
0
42
0.98
143760--143803
14
3.0
14
78
12
52
54
0
0
45
0.99
143905--143959
21
2.5
22
77
14
60
49
3
1
45
1.30
144047--144135
33
2.7
34
73
18
89
48
2
0
49
1.13
144054--144117
26
2.4
26
84
7
85
46
3
0
50
1.17
144589--144635
10
4.9
10
76
10
53
51
0
0
48
1.00
144827--144867
17
2.5
17
82
17
52
48
0
2
48
1.14
144838--144918
28
2.9
28
72
22
71
49
1
2
46
1.23
145336--145392
27
2.2
25
84
6
69
45
0
3
50
1.18
145353--145408
27
2.2
24
81
9
67
48
1
3
46
1.30
145992--146026
15
2.2
16
90
5
54
42
0
2
54
1.15
147225--147285
22
3.0
21
73
22
58
54
0
1
44
1.10
147305--147337
16
2.2
16
89
10
52
48
0
0
51
1.00
147355--147402
20
2.5
19
80
6
53
52
0
2
45
1.12
147640--147683
21
2.1
21
91
0
70
38
0
6
54
1.27
147703--147788
13
6.1
14
69
23
56
51
0
3
45
1.18
147733--147794
21
3.0
21
75
17
60
53
0
3
43
1.17
147767--147800
16
2.0
16
88
11
50
55
0
0
44
0.99
147835--147915
15
4.8
15
70
24
54
46
2
1
49
1.23
148007--148044
15
2.5
16
87
8
53
44
5
2
47
1.39
148043--148088
23
2.0
23
83
8
58
45
2
6
45
1.41
148511--148559
22
2.3
21
83
13
64
44
0
0
55
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148941--149001
21
3.0
20
81
11
63
49
4
1
44
1.33
149741--149776
18
1.9
19
88
5
56
38
2
2
55
1.29
151271--151317
24
2.0
22
88
8
67
51
0
2
46
1.13
151426--151513
22
3.9
22
67
20
56
50
2
2
45
1.27
151773--151839
23
2.9
22
81
14
73
44
1
2
50
1.26
151835--151884
26
1.9
27
92
8
86
34
2
4
60
1.27
152281--152312
3
10.7
3
100
0
64
34
0
0
65
0.93
152602--152717
28
4.2
28
70
17
91
49
1
0
48
1.17
152610--152682
34
2.1
34
85
9
96
49
2
0
47
1.15
152654--152717
16
4.0
16
74
8
67
48
0
1
50
1.10
152848--152914
27
2.8
23
78
20
75
46
0
0
53
1.00
152867--152936
27
2.6
27
81
6
70
48
0
2
48
1.16
153144--153174
16
1.9
16
93
0
53
48
3
0
48
1.17
153406--153450
18
2.4
18
88
3
63
46
6
2
44
1.42
153541--154187
179
3.6
177
85
6
783
41
9
7
40
1.67
154750--154818
36
1.9
36
82
11
88
47
5
0
46
1.26
154759--154809
18
2.8
19
75
16
54
47
1
0
50
1.12
155321--155373
18
3.1
16
80
17
54
47
1
0
50
1.12
155327--155433
18
5.9
17
69
17
56
50
3
0
45
1.19
155420--155469
24
2.1
24
81
7
57
42
0
2
56
1.11
155938--157567
181
9.1
179
73
8
811
39
7
10
42
1.68
157708--157776
25
2.7
24
77
16
66
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157720--157779
14
4.4
14
76
17
56
55
0
0
45
0.99
158213--158267
21
2.6
21
85
5
76
50
0
0
49
1.00
158294--158333
20
2.1
18
86
9
53
55
0
0
45
0.99
158359--158420
29
2.2
28
83
8
74
50
0
3
46
1.17
158614--158680
27
2.5
27
82
4
73
47
2
2
46
1.33
158769--158802
17
1.9
18
94
5
61
61
0
0
38
0.96
158886--158936
24
2.1
24
85
0
66
45
1
1
50
1.24
158985--159833
181
4.7
180
79
4
773
40
9
9
40
1.70
159712--159958
126
2.0
127
86
4
347
41
6
8
44
1.59
160006--160264
139
1.9
137
85
4
360
37
6
10
45
1.65
161541--161590
11
4.5
11
76
16
50
52
0
0
48
1.00
161546--161584
14
2.8
14
88
7
53
58
0
0
41
0.98
161546--161590
17
2.7
17
83
10
58
55
0
0
44
0.99
162151--162215
33
2.0
33
87
6
96
52
4
1
41
1.31
162137--162228
47
2.0
46
85
6
123
47
3
3
45
1.35
162152--162235
7
12.7
7
70
20
56
51
3
1
44
1.26
162412--162472
28
2.3
27
83
16
74
49
0
0
50
1.00
162432--162547
37
3.2
37
70
16
98
48
1
0
49
1.17
162412--162484
32
2.3
31
81
6
85
49
0
0
50
1.00
162439--162546
35
3.0
35
72
15
96
47
1
0
50
1.18
162412--162501
11
8.5
11
65
24
50
48
1
0
50
1.08
162580--162635
23
2.3
23
84
6
67
44
3
0
51
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162760--162839
26
3.0
26
67
22
60
48
0
2
48
1.14
162864--162892
11
2.7
11
94
5
51
41
0
0
58
0.98
163112--163175
20
3.3
19
76
20
60
50
6
0
43
1.27
163276--163314
20
2.0
19
85
5
51
43
0
0
56
0.99
163294--163333
17
2.4
17
83
4
55
42
2
0
55
1.13
163392--163434
18
2.4
19
80
11
54
44
2
0
53
1.13
164956--165000
23
2.0
23
86
8
65
42
0
4
53
1.21
165198--165247
26
2.0
24
84
7
64
40
0
8
52
1.31
165214--165280
24
2.8
24
84
11
75
41
0
4
53
1.21
165230--165296
6
11.2
6
73
13
50
44
0
1
53
1.09
165246--165305
16
4.0
15
74
25
56
46
1
0
51
1.10
165738--165771
17
1.9
18
88
5
52
58
0
0
41
0.98
166560--166619
27
2.2
27
85
5
77
45
1
1
51
1.21
166563--166619
12
4.5
12
72
20
53
43
1
1
52
1.21
167460--167504
21
2.1
22
84
12
58
42
6
0
51
1.28
167729--167753
13
1.9
13
100
0
50
40
4
0
56
1.18
167780--167817
20
2.0
20
89
5
60
55
0
7
36
1.29
167857--167887
15
2.0
16
93
6
55
45
3
6
45
1.45
167981--168041
23
2.7
23
76
19
72
45
1
1
50
1.21
168792--168844
17
3.2
17
78
5
54
47
1
1
49
1.23
168930--168992
17
3.5
17
79
12
63
50
3
0
46
1.17
169229--169290
31
2.0
31
81
12
74
33
4
3
58
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169254--169311
21
2.8
20
84
7
62
44
1
0
53
1.10
169332--169381
19
2.7
18
85
14
66
52
0
0
48
1.00
169741--169788
20
2.5
19
80
6
53
52
0
2
45
1.12
170825--170876
26
2.0
27
84
3
70
44
0
1
53
1.11
171242--171278
20
1.9
19
89
10
58
45
8
2
43
1.47
171730--171754
9
2.8
9
100
0
50
76
0
0
24
0.80

Tables:   1   2   3   4   5

The End!