Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168315.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_54, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  150814

Tables:   1   2   3   4   

This is table  4  of  4  ( 411 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132597--132631
16
2.3
15
90
5
52
37
5
2
54
1.39
132606--132668
27
2.3
27
83
5
74
44
3
3
49
1.34
133421--133472
19
2.7
20
79
11
54
53
0
1
44
1.11
133447--133494
19
2.5
20
80
16
57
56
0
2
41
1.11
133489--133532
19
2.3
19
80
7
54
54
4
0
40
1.21
134588--134617
15
2.1
15
93
6
53
60
0
0
40
0.97
135008--135184
6
30.0
6
66
25
60
46
0
1
51
1.12
135041--135206
16
11.7
15
69
23
87
46
0
1
51
1.08
135026--135150
51
2.4
53
80
15
145
49
0
1
48
1.10
135023--135153
26
5.2
25
72
22
98
48
0
1
49
1.10
135114--135168
14
4.1
14
75
15
53
50
0
0
49
1.00
135040--135195
29
5.6
28
68
23
87
46
0
1
51
1.08
135147--135223
16
4.9
16
80
15
72
42
0
0
57
0.99
135174--135217
6
7.3
6
82
17
56
47
0
0
52
1.00
135145--135226
22
3.8
21
74
17
71
43
0
0
56
0.99
135130--135228
32
3.2
31
78
13
80
46
0
0
53
1.00
135429--135523
47
2.2
46
81
12
119
50
2
3
44
1.29
135651--135684
16
2.1
16
94
0
59
47
0
0
52
1.00
136178--136213
18
2.0
18
100
0
72
61
0
0
38
0.96
136196--138563
177
13.4
176
72
10
1195
42
10
8
39
1.68
136244--137198
357
2.7
352
77
7
885
42
10
8
38
1.69
137325--138482
356
3.3
352
78
7
1060
41
10
7
40
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138559--139380
180
4.6
180
81
4
850
41
9
8
40
1.68
138155--138988
424
2.0
421
82
3
1003
40
9
8
40
1.69
138559--139380
181
4.6
180
80
6
799
41
9
8
40
1.68
139648--139686
19
2.1
19
85
9
53
48
2
2
46
1.29
139650--139717
31
2.3
29
80
7
75
47
2
5
44
1.42
139690--139752
9
7.1
9
75
14
60
47
0
1
50
1.10
139690--139752
17
3.6
17
85
8
74
47
0
1
50
1.10
139997--140050
18
2.8
20
75
18
60
57
0
3
38
1.17
140163--140192
14
2.1
14
93
0
51
53
0
0
46
1.00
142934--142994
23
2.7
22
75
7
59
42
3
0
54
1.17
142958--143012
18
3.1
18
75
15
60
49
3
0
47
1.19
143493--144014
171
2.9
180
76
8
411
41
8
8
40
1.66
144093--145458
180
7.6
179
78
6
1235
40
7
10
41
1.68
144093--145458
361
3.8
358
77
6
1240
40
7
10
41
1.68
144847--146118
660
1.9
659
81
4
1526
41
8
10
38
1.71
146109--146141
18
1.9
17
88
11
50
48
6
6
39
1.53
145505--146145
181
3.6
179
78
7
636
43
9
10
37
1.71
146104--146150
19
2.7
18
80
12
62
44
4
10
40
1.59
146167--148886
181
15.1
180
74
8
1837
41
9
8
41
1.67
146162--148876
356
7.6
346
73
11
1254
41
9
8
41
1.67
147562--147594
18
1.9
17
88
11
50
36
6
9
48
1.60
149285--149326
17
2.4
18
84
8
59
61
2
0
35
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
149764--149830
27
2.4
28
73
9
66
34
1
4
59
1.26
150654--150810
14
12.0
13
67
28
61
47
4
1
45
1.33
150654--150726
29
2.7
27
80
18
80
47
2
2
46
1.31
150678--150814
37
3.7
36
70
19
102
47
4
2
45
1.37
150654--150731
33
2.4
33
76
18
81
47
2
2
47
1.29
150723--150789
17
3.8
17
72
25
59
46
5
1
46
1.36
150754--150785
11
2.9
11
95
0
55
43
6
0
50
1.27

Tables:   1   2   3   4

The End!