Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold84
Parameters: 2 7 7 80 10 50 1000
Length:  4163231

Tables:   1   2   3   4   5   6   7   8   9   10   11   

This is table  11  of  11  ( 1218 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4110591--4110887
50
5.8
50
84
5
332
21
28
22
27
1.99
4118062--4118198
49
2.8
50
82
6
163
24
22
23
29
1.99
4130218--4130271
18
3.0
18
75
8
56
42
3
3
50
1.38
4133919--4133966
25
1.9
25
86
0
69
35
12
14
37
1.84
4133917--4133980
25
2.6
25
80
5
67
31
12
14
42
1.82
4136107--4136210
54
1.9
54
92
0
172
30
17
17
34
1.93
4136479--4136536
29
2.0
29
83
6
73
58
5
29
6
1.46
4136554--4136594
21
1.9
22
90
5
66
63
0
31
4
1.15
4136920--4136967
23
2.1
23
96
0
87
56
4
18
20
1.58
4137452--4137521
35
2.0
35
97
0
131
25
27
11
35
1.90
4138180--4138260
25
3.2
25
80
7
101
33
9
14
41
1.79
4141625--4141666
19
2.3
18
84
11
59
71
0
2
26
0.98
4144636--4144910
137
2.0
137
97
0
514
35
15
16
33
1.90
4145313--4145355
18
2.5
17
85
11
52
41
2
4
51
1.35
4149103--4149136
18
1.9
18
88
5
52
47
2
5
44
1.42
4149393--4149446
19
2.8
18
78
10
54
70
5
3
20
1.23
4150817--4150894
39
2.0
39
89
0
120
29
8
23
38
1.85
4161856--4162004
46
3.2
46
96
0
271
27
29
8
34
1.85

Tables:   1   2   3   4   5   6   7   8   9   10   11

The End!