Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold163
Parameters: 2 7 7 80 10 50 1000
Length:  1887244

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 745 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1835962--1835986
2
12.5
2
100
0
50
48
0
0
52
1.00
1836379--1836409
15
2.0
16
93
6
55
70
0
0
29
0.87
1841422--1841526
43
2.5
43
90
1
158
34
25
15
24
1.95
1841510--1841659
33
4.4
34
70
22
111
34
28
18
19
1.95
1841465--1841693
102
2.2
102
89
1
343
32
26
18
22
1.97
1841631--1841686
27
2.1
27
83
3
69
32
19
26
21
1.97
1848910--1849014
43
2.5
43
88
1
149
34
24
15
25
1.95
1848953--1849181
102
2.2
102
91
0
359
31
27
19
21
1.97
1853818--1853860
22
2.0
22
85
0
59
44
13
4
37
1.65
1853831--1854242
22
18.7
22
84
0
500
39
17
12
30
1.86
1853831--1854242
44
9.4
44
94
0
554
39
17
12
30
1.86
1855028--1855184
43
3.7
42
79
10
149
29
29
17
22
1.97
1858375--1858405
9
3.4
9
90
0
53
25
12
22
38
1.90
1858400--1858476
30
2.6
30
74
22
81
29
15
14
40
1.87
1867383--1867448
27
2.4
27
82
0
78
46
22
16
13
1.82
1875354--1875401
24
2.0
25
84
12
64
39
2
4
54
1.32
1880870--1880908
16
2.4
16
82
0
51
35
10
2
51
1.50
1884154--1884209
10
5.5
10
79
12
60
83
8
0
7
0.80
1884160--1884209
23
2.1
24
88
3
75
84
8
0
8
0.79
1884158--1884227
30
2.2
32
82
12
83
80
7
1
11
0.97
1884159--1884228
24
2.9
25
81
8
74
80
7
1
11
0.97
1885043--1885096
16
3.6
14
83
14
63
70
0
14
14
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1885158--1885345
95
2.0
97
97
2
362
29
14
31
23
1.95
1887003--1887226
44
5.1
44
67
16
167
28
21
23
26
1.99
1886980--1887244
88
3.0
88
92
0
422
29
22
22
26
1.99

Tables:   1   2   3   4   5   6   7

The End!